Matthias Ringwald 0c59996154 doc: update run loop documentation

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appendix

doc: cleanup build

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picts

doc: cleanup build

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architecture.md

doc: cleanup build

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how_to.md

doc: update run loop documentation

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index.md

doc: cleanup build

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integration.md

doc: cleanup build

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porting.md

doc: cleanup build

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profiles.md

doc: cleanup build

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protocols.md

doc: cleanup build

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quick_start.md

doc: cleanup build

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